Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNF-RATKLATTG-G--------F------LR-AGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
2J9C Chain:A ((3-103))
MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVIDIICENART-G-----------------------NPGDGKIFVIPVERVVR-
General information:
TITO was launched using:
RESULT:
Template:
2J9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53850 for 549 contacts (-98.1/contact) +
2D Compatibility (PS) -9385 + (NN) -4681 + (LL) 1140
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -74026.0 ( -134.84 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2J9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9C-query.scw
PDB file :
Tito_Scwrl_2J9C.pdb
: