Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLNLGSKKQASFYVACELYKEMAFNQHCK-----LGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNE-DDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD
4R7T Chain:A ((1-244))
MRLIPLKAAAQVGKWAAAHIVKRINEFQPTAERPFVLGLPTGGTPLATYKALIEMHKAGEVSFKHVVTFNMDEYVGLAADHPESYRSFMYNNFFNHID-IQEENINLLNGNTDDHEAECKRYEDKIKSYGKINLFMGGVGNDGHIAFNEPASSLSSRTRIKTLTEDTRIANSRFFDGDINQVPKYALTIGVGTLLDAQEIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPST-------------
General information:
TITO was launched using:
RESULT:
Template:
4R7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137149 for 1975 contacts (-69.4/contact) +
2D Compatibility (PS) -25907 + (NN) -16348 + (LL) 936
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -198118.0 ( -100.31 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4R7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R7T-query.scw
PDB file :
Tito_Scwrl_4R7T.pdb
: