Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFC-------VDNLPPVLL----PKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYK--ETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDT----------TKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDAD------LVFDVRFLPNPY-----YVVDLRPLTGLDKDVYNYVMKWKETEIF-------FEKLTDLLDFMI--PGYKKEGKSQLVIAIGCTGGQHRSV------------ALAERLGNYLNEV----FEYNVYVHHRDAHIESGEKK----- |
| 1WN1 Chain:A ((1-356)) | ----MRLEKFIHLLGERGFD----GALISPGTNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNNFPATFWHDGENPYAKLREILEELGISKGRILIEDTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKD---KEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIRELSDGIAFEPIVASGENAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLGLDVHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKGRRLTKAERELIIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105801 for 2218 contacts (-47.7/contact) +
2D Compatibility (PS) -31025 + (NN) -6221 + (LL) 104
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -150343.0 ( -67.78 by residue)
QMean score : 0.297
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