Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGT-MSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLS----ESEHIFIDKTYCQ----VANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
2AU3 Chain:A ((243-352))
--EEGFAILVEGYFDLLRLFSEGIR--NVVAPLGTALTQNQANLLSKFT--KKVYILYDGDDAGRKAMKSAIPLLLSAGVEVYPVYLPE-GYDPDEFIKEFGKEELRRLINSSGELF--------------------
General information:
TITO was launched using:
RESULT:
Template:
2AU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48688 for 688 contacts (-70.8/contact) +
2D Compatibility (PS) -11033 + (NN) -1789 + (LL) 1756
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -64004.0 ( -93.03 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2AU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AU3-query.scw
PDB file :
Tito_Scwrl_2AU3.pdb
: