Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASTLEIKDLHVSIE-DKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRG-ENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE |
1Z47 Chain:A ((13-234)) | --MTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAG--LERPTKGDVWIGGKRVTDLPPQ---KRNVGLVFQNYALFQHMTVYDNVSFGLREKRVP-----KDEMDARVRELLRFMRLES-Y-ANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEAL-EVADRVLVLHEGNVEQFGTPEEVY------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81687 for 1794 contacts (-45.5/contact) +
2D Compatibility (PS) -23510 + (NN) -5845 + (LL) 2352
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -119490.0 ( -66.61 by residue)
QMean score : 0.457
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