Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGL-KPEFYALAAGTKSDKDVRMK---FPNHPQVNTVY-GEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCDEPKDIDLVVWTAGIQPVE-VVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH--APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG |
| 1XHC Chain:A ((9-302)) | -SKVVIVGNGPGGFELAKQLSQ-----TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARAREPQIKGK-EYLLTLRTIFDADRIKESI---ENSGEAIIIGGGFIGLELAGNLAEA--GYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGFIEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFR-TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198842 for 2356 contacts (-84.4/contact) +
2D Compatibility (PS) -31189 + (NN) -18290 + (LL) 4412
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -264859.0 ( -112.42 by residue)
QMean score : 0.515
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