Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPA-----RIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
| 3AW8 Chain:B ((12-353)) | ---------------------RMLALAGYPLGLSFRFLDPSPEA-CAGQVGELVVGEFLDEGALLRFAEGLALVTYEFENVPVEAARRLEGRLPLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRRG------QALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEA--YALRAMEALDYVGVLALEFF-QVGEELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL-GSTAPRGQSAMVNLIGEKPPFAEVLKVEGA--HLHWYGKAVR-PGRKVGHITLRRDGLKALEEGL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124076 for 2733 contacts (-45.4/contact) +
2D Compatibility (PS) -36647 + (NN) -16127 + (LL) 924
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -201776.0 ( -73.83 by residue)
QMean score : 0.456
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