Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
1Y51 Chain:C ((2-86))
-AEKTFKVVSDSGIHARPATILVQTASKWNSEIQLEYNGKTVNLKSIMGVMSLGIPKGATIKITAEGADAAEAMAALTDTLAKEGL--
General information:
TITO was launched using:
RESULT:
Template:
1Y51.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44904 for 626 contacts (-71.7/contact) +
2D Compatibility (PS) -9058 + (NN) -2353 + (LL) 324
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -67391.0 ( -107.65 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1Y51.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y51-query.scw
PDB file :
Tito_Scwrl_1Y51.pdb
: