Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVG-----DNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS |
3FN5 Chain:A ((27-164)) | -----------------------------------------------------------------AQQLPVIGGIAIPELGINLPIFKGLGNT-ELIY-------GAGTMKEEQ--VMG-GENNYSLASHHIFGITGSSQMLFSPLERAQNG------MSIYLTDKEKIYEYIIKDVFTVAPERV----------------------DVID----DTAGLKEVTLVTCTDIE--ATERIIVKGELKTE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61167 for 1011 contacts (-60.5/contact) +
2D Compatibility (PS) -13848 + (NN) 307 + (LL) 9744
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -70514.0 ( -69.75 by residue)
QMean score : 0.467
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