Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEIVIASNNQGKINDFKVIFPD--YHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNT--TDRRAQFVCVISMSGPDM--ETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGEKNV
3TQU Chain:A ((4-200))
MLEIVLASQNSSKLAEMQELLRDLEIKFIPQTEFS-VPDIEETGSTFVENAIIKARHAAKQTGLPALADDSGLTIAALNSAPGVFSSRYAGKNATDAERIQKVLEALEAADDSDRSASFHCVIALMENENDPAPLICHGVWEGEIAREPRGKNGFGYDPIFYVPSHQRTAAELDPQEKNAISHRGQALEQLSTVLTEA---
General information:
TITO was launched using:
RESULT:
Template:
3TQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47413 for 1535 contacts (-30.9/contact) +
2D Compatibility (PS) -21018 + (NN) -12423 + (LL) 36
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -99068.0 ( -64.54 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3TQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQU-query.scw
PDB file :
Tito_Scwrl_3TQU.pdb
: