Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNT----NIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHESNLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEP-RNEQAANTLKELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVAS---SLVHVSQKNGQEHHLVNKLAAGGFRDITRIA---SSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
| 2RCY Chain:A ((4-239)) | NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKNT------TLN--YMSSNEELARHCDIIVCAVKPDIAGSVLNNIKP-YLS-SKLLI--SICGGLNIGKLEEMVGSENKIVWVMPNTPCLVG----------EGS-FIYCSNKNVNS-TDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGGITAVGLYSLEK--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120153 for 1629 contacts (-73.8/contact) +
2D Compatibility (PS) -24099 + (NN) -8933 + (LL) 8908
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -154177.0 ( -94.65 by residue)
QMean score : 0.405
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