Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNYSFYQFVMTV---RGRHDDKGRLAE-------EIFDDLAFPKHDDDFNILSDYIETHGDFTLP----------------MSVFDDLYEEYTEWLKF------
1N6Z Chain:A ((1-105))
MSKSNTYRMLVLLEDDTKINKEDEKFLKGKPGKMHEFVDELILPFNVDELDELNTWFDKFDAEICIPNEGHIKYEISSDGLIVLMLDKEIEEVVEKVKKFVEENN
General information:
TITO was launched using:
RESULT:
Template:
1N6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12930 for 369 contacts (-35.0/contact) +
2D Compatibility (PS) -7710 + (NN) -1519 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -28809.0 ( -78.07 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_1N6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N6Z-query.scw
PDB file :
Tito_Scwrl_1N6Z.pdb
: