Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MKIISISETPNHNTMKITLSE----SREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHV-MDFISVDKENDANWETVLPKVEAVFE---------------------------
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATR--WIGDYEEVNGFEYIDKAPSIYFSVG--DDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12014 for 482 contacts (-24.9/contact) +
2D Compatibility (PS) -8301 + (NN) -1383 + (LL) 172
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -27526.0 ( -57.11 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: