Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSV-LEQASLHLLSSGGKRVRPAFVILSSQF-GKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDN-------RV----------HQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 3KRF Chain:D ((8-271)) | -----MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTA---MPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGM---------AEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFA---DRLNREAQEQ--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33460 for 1976 contacts (-16.9/contact) +
2D Compatibility (PS) -25963 + (NN) -14496 + (LL) 5516
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -91253.0 ( -46.18 by residue)
QMean score : 0.384
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