Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDLNKKYLIDLHQHQNSSIEVLREFAEGNEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE
3C3P Chain:A ((7-210))
-DSRIGAYLDGLLPEADPVVAAMEQIARERNIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG--QRDIDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRG------------------ALREFNHHLSRRRDFFTTIVPVGNGVLLGYRLS
General information:
TITO was launched using:
RESULT:
Template:
3C3P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105702 for 1573 contacts (-67.2/contact) +
2D Compatibility (PS) -21234 + (NN) -8086 + (LL) 1936
1D Compatibility (HY) -12000 + (ID) 2000
Total energy: -147086.0 ( -93.51 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3C3P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3P-query.scw
PDB file :
Tito_Scwrl_3C3P.pdb
: