Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHAKPIELDRE---IVVVSQ-----NDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIE-SVRWTGRIEQVH----DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDE--IQLVDDYVEFIKN--Y-QGDTLVITGSLYFISEVKSKLDFEAL |
| 1J6U Chain:A ((102-431)) | --------------------------------------KEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVF-------------LGGIMDS----------------------------LEHG-------NY-EK-GNGPVVYELDESEE--FFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTDLVVTFAEDELTSHL-GD---------VTFGVKKGTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSL------GYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHR----GNFAKAL-QLADEVVVTEVYD----SGKMIWDSLKSLGKEAYFVEKLPELEKVISVSENTVFLFVGAGDI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17633 for 2359 contacts (7.5/contact) +
2D Compatibility (PS) -29612 + (NN) 9662 + (LL) 9156
1D Compatibility (HY) 14800 + (ID) 1050
Total energy: 20589.0 ( 8.73 by residue)
QMean score : 0.109
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