Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGSKGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQEYLKQGYNVIMDIPLLFENE-LENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED
4I1V Chain:B ((12-183))
----IGLTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRALIFSDEDARRRLEAITHPLIR--AETEREARDAQGPYVIFVVPLLVESRNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQVEAIIARQATREARLAAADDVIVN------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4I1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34698 for 1251 contacts (-27.7/contact) +
2D Compatibility (PS) -18802 + (NN) -5645 + (LL) 2172
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -68773.0 ( -54.97 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4I1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I1V-query.scw
PDB file :
Tito_Scwrl_4I1V.pdb
: