Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFD--SFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIG----IANKVLMLENSTYSVISPEGAAALLWKDSNLAKI--------AAE---TMKITAHDIKQLGIIDDVISEPLGGAHKDVEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE |
| 1VRG Chain:A ((291-514)) | --------------------------------------------------------------NKGYDVRDVIKRVVDHGEFFEVQPY--FA--KNIVIGFARIQGKTVGIVANQPS--------VLAGVLDIDSSDKAARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVI---------DPRE----TRKYIMRALEVCETKV-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101071 for 1670 contacts (-60.5/contact) +
2D Compatibility (PS) -22589 + (NN) -5047 + (LL) 7208
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -136599.0 ( -81.80 by residue)
QMean score : 0.479
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