Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY
1R69 Chain:A ((2-63))
-ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKT--KRPRFLPELASALGVSVDWLLNGT---------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50264 for 427 contacts (-117.7/contact) +
2D Compatibility (PS) -6382 + (NN) -1167 + (LL) 10924
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -49489.0 ( -115.90 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1R69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R69-query.scw
PDB file :
Tito_Scwrl_1R69.pdb
: