Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRLWASLLTVIIYILSQFLPLLIVKKL------------PFVQYSGI-----ELTKAVIYI----QLVLFLIAATTIILIN--LKIKNPTKLELEVKE-PKKYIIPW---ALLGFALVMIYQM-----------VVSIVLTQIYGGQQV--SPNTEKLIIIARKIPIFIFFVS-----------IIGPLLEEYVFRKVIFGELFNAIKGNRIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAY-----VWTKRLAVP-------------IIIHMLQNGFVVIFQLL------NPEA-----------------LKKATEQANFIYHIFIP-------------------- |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262620 for 1607 contacts (-163.4/contact) +
2D Compatibility (PS) -26446 + (NN) 4512 + (LL) 0
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -299404.0 ( -186.31 by residue)
QMean score : 0.204
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