Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLS-KDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDN-RQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI |
1KGS Chain:A ((4-204)) | -RVLVVEDERDLADLITEALK-----KE-MFTV-DVCYDGEEGMYMALN-EPFDVVILDIMLPV-HDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLR---ELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYL--VMNKNRVVTKEELQEHLW---VFSDVLRSHIKNLRKKVD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87214 for 1422 contacts (-61.3/contact) +
2D Compatibility (PS) -20851 + (NN) -7102 + (LL) 3900
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -119967.0 ( -84.36 by residue)
QMean score : 0.381
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