Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD-------------
1IC2 Chain:A ((1-79))
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT
General information:
TITO was launched using:
RESULT:
Template:
1IC2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3525 for 206 contacts (17.1/contact) +
2D Compatibility (PS) -6160 + (NN) -5138 + (LL) 0
1D Compatibility (HY) 800 + (ID) 600
Total energy: -7573.0 ( -36.76 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1IC2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IC2-query.scw
PDB file :
Tito_Scwrl_1IC2.pdb
: