Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKFDHIIHYIDQLD------RFSFP-----------GDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNE-----KLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQ----LLYIMNQDDD------EIKPPFFIQWEESDSMRTKKLQKYFQKQFSIE-------TVIVK----SKNRSQTVSNWLKWFD---------MDIVEENDHYTDLILKNDDIYFR-------IEDGKVSKYHSVIIKDAQATSPYSIFI---RGAIYRFEPLV--- |
| 2XBG Chain:A ((38-345)) | AIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGG--QTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNG--------SAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYK-ILFFSPDQGFILGQKGILLRYVTDLTAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7989 for 1622 contacts (-4.9/contact) +
2D Compatibility (PS) -25485 + (NN) 4178 + (LL) 928
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -33818.0 ( -20.85 by residue)
QMean score : 0.219
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