Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIVAVNQQVD--Q----------SKVLKDKFKGVT--KIGDGDVEKVAKEKPDLIIVYST--D---KDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQK--L----TAKAGWAEVKQEEIEK-YAGDYIVSTSEGK-PTPGYESTNMWKNLKATKEGHIVKVDAGTYWYNDPYTLDFMRKDLKEKLIKAAK |
| 3TLK Chain:A ((27-319)) | --------------------------ADWPRQITDSRGT-HTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVA-KERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQLAAAKEQIKLPP-QPVTAIVYTAAAHSANLWTPES--AQGQMLEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF-RLDYYSAMQVLDRLKALFL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25564 for 2170 contacts (-11.8/contact) +
2D Compatibility (PS) -28613 + (NN) -7380 + (LL) 2588
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -72419.0 ( -33.37 by residue)
QMean score : 0.455
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