Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRN-GKVNVIEGIYESLVMDEYVKMTIGMPGLS------ETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
3UID Chain:A ((5-162))
--DVKHDLDTLTLTITAEFAAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHDLRPGGRVTYFMT-GPDGEKYAGYWEITAVDEPHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHDGG-TRATYVGT-YASAEAL---------QQVLDMGVIEGASSAINQIDALLTAT---
General information:
TITO was launched using:
RESULT:
Template:
3UID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29381 for 1088 contacts (-27.0/contact) +
2D Compatibility (PS) -15868 + (NN) -615 + (LL) 1288
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -48026.0 ( -44.14 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_3UID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UID-query.scw
PDB file :
Tito_Scwrl_3UID.pdb
: