Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDEN-KEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIA-KDNHIKTTPTAFINGE-----------KVEDPYDYESYEKLLKDKIK
3F4S Chain:A ((31-211))
-----------------------DKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDY-RGLKAAMLSHCYE--KQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQ---DAFNQCINDK--KIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYG
General information:
TITO was launched using:
RESULT:
Template:
3F4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19617 for 1276 contacts (-15.4/contact) +
2D Compatibility (PS) -17859 + (NN) -6039 + (LL) 3064
1D Compatibility (HY) -11600 + (ID) 1600
Total energy: -53651.0 ( -42.05 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3F4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F4S-query.scw
PDB file :
Tito_Scwrl_3F4S.pdb
: