Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGKSITCKSIIGLNPERLGVTGEIIFDGTSMLSLSESQRKKYRGKDIAMVMQQGSRAFDPSTTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLMIALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIADRVVVMKNGQLIEHGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD |
4U02 Chain:D ((19-239)) | -------------------VLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQ---EGEVVVDG---LSVKDDRALREIRREVGMVFQQFN-LFPHMTVLENVTLAPMRVR-RWPREKAEKKALELLERVGILDQAR---KYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQ------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113632 for 1810 contacts (-62.8/contact) +
2D Compatibility (PS) -23686 + (NN) -8485 + (LL) 3680
1D Compatibility (HY) -17200 + (ID) 3650
Total energy: -162973.0 ( -90.04 by residue)
QMean score : 0.562
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