Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
| 1VZ0 Chain:D ((23-207)) | ----------------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRP-QGDGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEMG-LTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAE---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71099 for 1201 contacts (-59.2/contact) +
2D Compatibility (PS) -20295 + (NN) -12743 + (LL) 6084
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -116653.0 ( -97.13 by residue)
QMean score : 0.736
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