Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRTQARGAVVELLYAFESGNEEIKKIASSMLEEKKIKN-NQLAFALSLFNGVLEKINEIDALIEPHLKDWDFKRLGSMEKAILRLGAYEIGFTPTQNP-IIINECIELGKLYAEPNTPKFLNAILDSLSKKLAQKPLI
4EYA Chain:D ((3-132))
--YRKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYITSS--
General information:
TITO was launched using:
RESULT:
Template:
4EYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87785 for 994 contacts (-88.3/contact) +
2D Compatibility (PS) -13837 + (NN) -9485 + (LL) 592
1D Compatibility (HY) -12000 + (ID) 2200
Total energy: -124715.0 ( -125.47 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4EYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYA-query.scw
PDB file :
Tito_Scwrl_4EYA.pdb
: