Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKYSAIP-TPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKE--HGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPY---LENMAWVNFGGGHHITRSDYD-VNLLIQTIKDFKER-Y--HNTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPY--RPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKSFSYEDYKNRN
2NVA Chain:A ((12-372))----HPHQTKSFYVSSPKIVEDLIDQWTILFP--RVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQI--GV-SPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYH------------PNCKMILRIRCDDPN------ATVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADID---LSTYMSDYINDAIKDFFPEDTVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDV------------PDDEEYVPSVLYGCTCDGVDVINHNVALP-ELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVYYI--------------------


General information:
TITO was launched using:
RESULT:

Template: 2NVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185016 for 2875 contacts (-64.4/contact) +
2D Compatibility (PS) -36682 + (NN) -12010 + (LL) 3764
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -242044.0 ( -84.19 by residue)
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_2NVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NVA-query.scw
PDB file : Tito_Scwrl_2NVA.pdb: