Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKFLSLTLGSLLVSALSAEDNGFFVSAGYQIGESAQMVKNTKGIQDLSDSYERLNNLLTNYSVLNALIRQSADPNAINNARGNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAI-SPCGPGKDTSKNGGVQTFHNTPSNQWGGTTITCGTTGYEPGPYSILSTENYAKINKAYQIIQKAFGSSGKDIPALSDTNTELKFTINKNNGNTNTNNNGEEIVTKNNAQVLLEQASTIITTLNSACPWINNGGAGGASSGSLWEGIYLKGDGSACGIFKNEISAIQDMIKNAAIAVEQS-KIVAANAQNQRNLDTGKTFNPYKDANFAQSMFA--NAKAQAEILNRAQAV-----VKDFERIPAEFVKDSLGVCHEVQNGHLRGTPSGTVTDNTWGAGCA---------YVGETVTNLKDS-IAHFGDQAERIHNARNLAYTLANFSSQYQKLG--------EHYDSITAAISSLPDAQSLQNVVSK------KTNPNSPQGIQDNYYIDSNIHSQVQSRSQELGSNPFRRAGLIAAS--TTNNGAMNGIGFQVGYKQFFGKNKRWGARYYGFVDYNHTYNKSQFFNASSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIALAGTSWLNSQYVNLANVNNYYKAKINTANFQFLFNLGLRMNLARKKHRATDNAAQHGIE-LGTKIPTINTNY------------------YSLLGTTLQYRRLYSVYLNYVFAY----------------- |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLAS----------RRDELLRA-----DITSLLKALE-LSGHWEWALALLRWAGKEGAAD-------------------ASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRA---------GRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA-----AGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKAR---------GHAPSVVTYNAL-LQVFGKA-GNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRS-GCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEV--KARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLS----PDLITYNSLMDMYAK-----CSESWEAEKILNQLKCSQTMKP--DVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50008 for 4814 contacts (10.4/contact) +
2D Compatibility (PS) -62981 + (NN) 3721 + (LL) 2644
1D Compatibility (HY) -25200 + (ID) 5300
Total energy: -37108.0 ( -7.71 by residue)
QMean score : 0.159
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