Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIY-SESG-MMD--YGQTEALEEEKAKALLKQFEDAFKKENIEC---ESVLKSGDLIDVVLDMAK--DYDLLLIGASESNLLYR-LFISHQNSLVEQSSIPVVIAK
3HGM Chain:A ((3-147))
NRIMVPVDGSKGAVKALEKGVGLQQLT-GAELYILCVFKHHSLLEASLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVLVV-
General information:
TITO was launched using:
RESULT:
Template:
3HGM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106195 for 1031 contacts (-103.0/contact) +
2D Compatibility (PS) -14518 + (NN) -6492 + (LL) 128
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -132527.0 ( -128.54 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3HGM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HGM-query.scw
PDB file :
Tito_Scwrl_3HGM.pdb
: