Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKARARFPLRLMVQEVK
1R6O Chain:D ((25-93))
--------PSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
General information:
TITO was launched using:
RESULT:
Template:
1R6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34225 for 436 contacts (-78.5/contact) +
2D Compatibility (PS) -7815 + (NN) -8076 + (LL) 760
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -58756.0 ( -134.76 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1R6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R6O-query.scw
PDB file :
Tito_Scwrl_1R6O.pdb
: