Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERHKRLVVAQFDPFFPK--NP-FLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIK--EVTLKVNKRYGGFLLKDTFLERYGIAL-----------DERFIITKIGAHLPKGLDF-LKLGDRILWVNHKSVSFNP-KALREALS--TPKIELLVWRQGFEFYIKVR |
| 3GSL Chain:A ((92-249)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGP----------KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAETMA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59803 for 823 contacts (-72.7/contact) +
2D Compatibility (PS) -14703 + (NN) -3249 + (LL) 13352
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -72203.0 ( -87.73 by residue)
QMean score : 0.437
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