Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKALTTEKERLERENKNLTADKENLTKEKTELQKQVNELKNSKQVLENEKADWLREKENLTKDRENLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSKQVLENEKADLTNENTKLKTDKTDLTEKNQRLTTEKTELNNKITGLATEKERLAADKENLTKESRQRKPN |
| 2W83 Chain:C ((16-55)) | -----------------------------LENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKN------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 11928 for 151 contacts (79.0/contact) +
2D Compatibility (PS) -4505 + (NN) -3740 + (LL) 10964
1D Compatibility (HY) -2400 + (ID) 650
Total energy: 11597.0 ( 76.80 by residue)
QMean score : 0.727
|
|
|