Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDRLNFNFVATTHSAMDLIASVLSDSKYYLESFYNQASQELGDKRSDKGEKLAELFDLLFEYIKDSKFERLKEP-SAYDYSCKKLYPEQ-NTSQKMRRVVLRGYKHNDKMYHTIVDMGS
3A6M Chain:A ((103-158))
---------------------------------------------------------IRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPGEPGKVAKVFQRGFRMGEALVRPARVAVG
General information:
TITO was launched using:
RESULT:
Template:
3A6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1583 for 268 contacts (-5.9/contact) +
2D Compatibility (PS) -5466 + (NN) -1799 + (LL) 3912
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -9386.0 ( -35.02 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_3A6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A6M-query.scw
PDB file :
Tito_Scwrl_3A6M.pdb
: