Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSL------KLTYESTLQQDLKKI--LGIEEVIMLSTSP----MELRLANQKLGNRFI---KTLQAMNELDMG---------AFFNAYAQTTKDPTH----ATSYGVFAASLN--------------MELKKALRHY--LYAQTSNMVINCVKS--VPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQH-------ESLYSRLYMS--------------------------------------- |
| 4TXA Chain:A ((6-399)) | PQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIE----LLPVNSALLQLVGLCSGVEDTKHYEEAKKCVEELAL-YLKPVLS-RPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPARQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5582 for 1533 contacts (-3.6/contact) +
2D Compatibility (PS) -26772 + (NN) -13276 + (LL) 408
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -59272.0 ( -38.66 by residue)
QMean score : 0.284
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