Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALN-------ERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKK----MGL--NIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH--------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 2D1F Chain:A ((38-342)) | ------------------------------------------------------------------------------------GTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMA---VTDALAH--GQRAVLCASTGNTSASAA-AYAARAGITCAVLIPQGKIAMGKLAQAVMH-GA--KIIQIDGNFDDCLELARKMAAD-----F-----PTISLVNSVNPVRIEGQKTAAFEIVDVLGT-------APDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLV----LGEPV----SHPETIATAIRIGSPASWTSAVEAQQQ-------------S---------------KGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDMPSVSPVPVDPVAVVEKLG----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101587 for 2592 contacts (-39.2/contact) +
2D Compatibility (PS) -30115 + (NN) -7139 + (LL) 13200
1D Compatibility (HY) -2800 + (ID) 2950
Total energy: -131391.0 ( -50.69 by residue)
QMean score : 0.310
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