Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MLIHICCSVDNLYFLKKAKEAFAGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELLEGDYELEKFLDKA--KGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQ-----RHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQKTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
| 3EDV Chain:A ((2-323)) | SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELG----QDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAG--------DKADDIQKRENEVLEAWKSLLDACESRRVRL--VDTGDKFRFFSMVRDLMLWMEDVIRQ---IEAQEKPRD--------------VSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH-----------------------YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16414 for 2009 contacts (8.2/contact) +
2D Compatibility (PS) -33696 + (NN) -17398 + (LL) 5284
1D Compatibility (HY) -5600 + (ID) 2250
Total energy: -37246.0 ( -18.54 by residue)
QMean score : 0.225
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