Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIHMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHVANLPEVIKSPSLVDFVNALKNRDTAIIVSTGPSLNKQLPLLKEIAPYATLFCIDASFPILARAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIQKGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGKVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPTQSEQAKNLKIAKKKCEEIIKYANEKKTQVEEAFLKVAEFLEKVEKLHEKNKLEELDFEELENLSAEIDNVKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYIYAHKYWLFSLAGGMDCVIEAIKMALKEW |
3CQ9 Chain:A ((3-49)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIVNLLVGGPTANYPAD-LT--TIPGPWVGADRGALRLVKRGIQPVMVVGDFTVKDALVGAIVVKPDQDHTDTQLAIKSIFEQLQPDEVHLYGATGGRLDHLLANMWLVLDPVFRQWAPQIKLIDKQNSVRFFLPGDYQITKEADKRYLAFVPLMPMHLTLPDEKYQLDAAYNAYPISWASNEFSGNTGHFSFDAGVLAVIQSRD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33662 for 277 contacts (-121.5/contact) +
2D Compatibility (PS) -5312 + (NN) -4590 + (LL) 30632
1D Compatibility (HY) -800 + (ID) 500
Total energy: -14232.0 ( -51.38 by residue)
QMean score : 0.520
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