Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESVKTVKTNKVGKNTETANTEASKETHFKQASAITNTLRSIGGIFTKIAKKVRELVKKHPKKSSVALVVLTHIACKRAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQERQKTEQERQKTNKSEIELEQERQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM |
3BR1 Chain:D ((62-120)) | ------------------------------------------------------------------------------------------------------------------------------------------------QEQWKKEQIKAKTNREKFYLYNELSLTTQYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34347 for 288 contacts (119.3/contact) +
2D Compatibility (PS) -6541 + (NN) -3517 + (LL) 21344
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: 42583.0 ( 147.86 by residue)
QMean score : 0.520
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