Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMV--KDFCSRVYELSEFLDKKLQ------VKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
| 3QY9 Chain:A ((3-243)) | SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKTPYQQYQHIADVKGADVAIDFSNPNLLFPLLD--EDFHLPLVVAT---TGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPS-GTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVN-----KPNGFYTFDNL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -53642 for 1678 contacts (-32.0/contact) +
2D Compatibility (PS) -22963 + (NN) 3101 + (LL) 560
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -77144.0 ( -45.97 by residue)
QMean score : 0.244
|
|
|