Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MSEFHQVYDPLG-----NIWLSAL--VALLPILLFFLSLMVFKLKGYTAAFLSVALSAIIAVLVYKMPVSMVGSSFLYGFLYGLWPIAWIIIAAIFLYKLSVKSGYFE-ILKESVQSI-----TLDHRILVILI------GFCFGSFLEGAIG--FGGPIAITAAILVGLGLSPLYSAGLCLIANTAPVAFGAVGIPISAMASAV-GVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAGAQFLSSNYLGPELPGIISALVSLVATALFLKFWQPKTIFRSDGKAISFTKTNHHICKIYVAWSPFVILVLVIVLWIQPFFKALFEKDGLLAFSNFYFEFNNISNHIFKSP---------PFVEANQSVNFPVVFKLLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEVLTLTANTVGGTLGKMISPQSIAIACAAV-------GLAGKESDLFKFTVKYSLIFVAIMGVVISAIAYWIPEVVPAIK |
| 4Q86 Chain:A ((2-583)) | TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGAT---KKAALASALGEYFERLSTNYFFADFWLGETIANGP--FVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDG--SLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVA---EHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE-DLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLL--KAYEKLQRAKAAF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -553441 for 4328 contacts (-127.9/contact) +
2D Compatibility (PS) -53049 + (NN) 14738 + (LL) 2492
1D Compatibility (HY) -11200 + (ID) 4600
Total energy: -605060.0 ( -139.80 by residue)
QMean score : 0.207
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