Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGL--------------TQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSIPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKE-SGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIKFLVLASTF-YMLSTLEGSIQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKR-E---IYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 3WFD Chain:B ((10-458)) | -------FASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLF---PAIPFNVARMVHTN-LLIVWLLFGFMGAAYYLVPEESDC----ELYSPKLAWILFWVFAAAGVLTILGYLLVPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGRKTAI--SMVLMTGLI-GLA-------LLFLFS----------FYNPENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTINRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPA--DGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSF---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -402371 for 3710 contacts (-108.5/contact) +
2D Compatibility (PS) -42040 + (NN) 4107 + (LL) 4968
1D Compatibility (HY) -32800 + (ID) 4050
Total energy: -472186.0 ( -127.27 by residue)
QMean score : 0.295
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