Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWG--SKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVP--------HSIMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
| 3C2C Chain:A ((3-111)) | -----------------------------------------------DAAAGEKVS--KKCLACHTFDQGGAN----K-VGPNLFGVFENTAAHKDNYAYSESYTEMKAKGLTWTEANLAAYVKNPKAFVLEKSGDPKAKSKMT-FKLTKDD--EIENVIAYLKTLK--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10731 for 689 contacts (-15.6/contact) +
2D Compatibility (PS) -10030 + (NN) 1808 + (LL) 10580
1D Compatibility (HY) 2400 + (ID) 850
Total energy: -6823.0 ( -9.90 by residue)
QMean score : 0.154
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