Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKKLFYKIHCLVDNLSLENQQKLKETLVPFSAFASVDFLDISTPNLYTTSVEPSVIDKIHEAFLQLNIYAKTRFSKMVMCRLFLASLFPQ-YDKIIMFDADTLFLNDVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLYEHYLKEKDMQIICENHYNVGFLIVNLKLWRADKLEEHLLNLTHQKGQCVFCPEQDLLTLACYQKVLQLP-YIYNAHPFMANQK--------RFIPNQQEIIMLHFYFVGKPWILPTA-LYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLSKIFKRLKERFLNS |
| 3TZT Chain:A ((5-276)) | ---ADALLLTLDENYIPQMKVLMTSIYINNPG----------------RIFDVYLIHSRISEDKLKDLGEDLKKF----SYTLYPIRAT------------------------------PKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASH----------------------------------------YYNSGLLLINLKRAREEIDPDEIFSFVEDN--------QDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFTSLYKHYMSLTKRYLA-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170252 for 1471 contacts (-115.7/contact) +
2D Compatibility (PS) -23151 + (NN) -9081 + (LL) 12020
1D Compatibility (HY) -17600 + (ID) 2300
Total energy: -210364.0 ( -143.01 by residue)
QMean score : 0.344
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