Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESL-RLPIIKAGLQRIATTP-IELNDEQMELTEKLLDRIEDDDDVVALYTNIE |
2JSX Chain:A ((9-71)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLVVQAKSERISDISTQLNAFPGCEV--AVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22056 for 404 contacts (-54.6/contact) +
2D Compatibility (PS) -6361 + (NN) -1202 + (LL) 11992
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -21077.0 ( -52.17 by residue)
QMean score : 0.525
|
|
|