Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVLMIEDDIELAEFLSEFLLQHGIHVINYDEPYTGISAANTQNYDLLLLDLTLPNLDGLEVCRRISKQKHIPIIISSARSDVEDKIKALDYGADDYLPKPYDPKELLARIQSLLRRSHKKEEVSEPGDANIFRVDKDSREVYMHEKKLDLTRAEYEILSLLISKKGYVFSRESIAIESESINPESSNKSIDVIIGRLRSKIEKNPKQPQYIISVRGIGYKLEY
4L85 Chain:C ((3-120))
MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILALGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4L85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81045 for 927 contacts (-87.4/contact) +
2D Compatibility (PS) -12952 + (NN) -8420 + (LL) 7180
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -106937.0 ( -115.36 by residue)
QMean score : 0.711
(partial model without unconserved sides chains):
PDB file :
Tito_4L85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L85-query.scw
PDB file :
Tito_Scwrl_4L85.pdb
: