Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIAMA-NFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAF-----LHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSE---QLENID-LNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQ--------KTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL |
| 1YYA Chain:B ((1-248)) | MRRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSE-AAVLPAFP-ILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKG-EAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137438 for 1937 contacts (-71.0/contact) +
2D Compatibility (PS) -24272 + (NN) -7461 + (LL) 60
1D Compatibility (HY) -13600 + (ID) 4150
Total energy: -186861.0 ( -96.47 by residue)
QMean score : 0.538
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