Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTENTDETHLRETKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQGGGFIAFNLFLI
2K5J Chain:A ((7-50))
----------------------------IDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQG
General information:
TITO was launched using:
RESULT:
Template:
2K5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7443 for 187 contacts (-39.8/contact) +
2D Compatibility (PS) -4803 + (NN) -2356 + (LL) 1280
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -15572.0 ( -83.27 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2K5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5J-query.scw
PDB file :
Tito_Scwrl_2K5J.pdb
: